seqcraft.onrender.com WebMCP Tools, Schemas & Agent Capabilities

seqcraft.onrender.com

demo Unverified (seed import) Health & Education 57 tools imperative implementation

Inspect plasmids, simulate PCR and restriction digests, compare constructs, and prepare cloning proposals in one exact, private workspace.

First seen 2026-09-14 · Last seen 2026-09-14 · Source: webmcp.com

Answer 14 · Act 42 · Transact 1 · Score: Not yet scored

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seqcraft_simulate_golden_gate

act imperative

Simulate Golden Gate multi-fragment assembly using Type IIS restriction enzymes (e.g. BsaI, BsmBI, AarI). Validates compatible overhang pairs, checks junction fidelity, and returns the assembled construct.

Input schema

Property	Type	Required	Description
`documentIds`	array	yes	List of document IDs participating in the assembly in order.
`enzymeName`	string	no	Type IIS enzyme driving the assembly (default: BsaI).

Raw JSON schema

{
  "type": "object",
  "properties": {
    "documentIds": {
      "type": "array",
      "items": {
        "type": "string"
      },
      "description": "List of document IDs participating in the assembly in order."
    },
    "enzymeName": {
      "type": "string",
      "enum": [
        "BsaI",
        "BsmBI",
        "BbsI",
        "AarI",
        "SapI",
        "PaqCI",
        "Esp3I"
      ],
      "description": "Type IIS enzyme driving the assembly (default: BsaI)."
    }
  },
  "required": [
    "documentIds"
  ],
  "additionalProperties": false
}

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