seqcraft.onrender.com
Inspect plasmids, simulate PCR and restriction digests, compare constructs, and prepare cloning proposals in one exact, private workspace.
First seen 2026-09-14 · Last seen 2026-09-14 · Source: webmcp.com
Answer 14 · Act 42 · Transact 1 · Score: Not yet scored
Tool inspector
seqcraft_mutate_feature
Create, update, delete, or batch-create biological annotations on the active or specified construct using 1-based closed coordinates [start1, end1]. Immediately updates document annotations and records revision provenance.
Input schema
| Property | Type | Required | Description |
|---|---|---|---|
documentId |
string | no | Target document ID. If omitted, uses active document. |
action |
string | yes | Annotation mutation action to perform. |
feature |
object | no | Single feature input for create or update action. |
features |
array | no | Array of feature inputs for batch_create action. |
featureId |
string | no | Feature ID to delete (for delete action). |
Raw JSON schema
{
"type": "object",
"properties": {
"documentId": {
"type": "string",
"description": "Target document ID. If omitted, uses active document."
},
"action": {
"type": "string",
"enum": [
"create",
"update",
"delete",
"batch_create"
],
"description": "Annotation mutation action to perform."
},
"feature": {
"type": "object",
"description": "Single feature input for create or update action.",
"properties": {
"id": {
"type": "string",
"description": "Feature ID (required for update)."
},
"name": {
"type": "string",
"description": "Annotation name / label."
},
"type": {
"type": "string",
"enum": [
"CDS",
"gene",
"exon",
"intron",
"signal_peptide",
"transit_peptide",
"cleavage_site",
"promoter",
"terminator",
"polyA_signal",
"5'UTR",
"3'UTR",
"RBS",
"regulatory",
"enhancer",
"operator",
"ncRNA",
"lncRNA",
"tRNA",
"rRNA",
"snRNA",
"snoRNA",
"origin",
"repeat_region",
"LTR",
"transposon",
"engineered_region",
"misc_structure",
"protein_bind",
"primer_bind",
"misc_binding",
"misc_difference",
"resistance marker",
"tag",
"reporter",
"crispr_target",
"recombination_site",
"att_site",
"loxP_site",
"frt_site",
"source",
"misc_feature"
],
"description": "Biological feature type."
},
"start1": {
"type": "integer",
"minimum": 1,
"description": "1-based inclusive start coordinate."
},
"end1": {
"type": "integer",
"minimum": 1,
"description": "1-based inclusive end coordinate."
},
"strand": {
"type": "string",
"enum": [
"+",
"-"
],
"description": "Strand orientation (+ for forward 5'->3', - for reverse complement)."
},
"qualifiers": {
"type": "object",
"description": "Additional GenBank qualifiers (e.g. note, gene, product)."
}
},
"additionalProperties": false
},
"features": {
"type": "array",
"description": "Array of feature inputs for batch_create action.",
"items": {
"type": "object",
"properties": {
"name": {
"type": "string"
},
"type": {
"type": "string",
"enum": [
"CDS",
"gene",
"exon",
"intron",
"signal_peptide",
"transit_peptide",
"cleavage_site",
"promoter",
"terminator",
"polyA_signal",
"5'UTR",
"3'UTR",
"RBS",
"regulatory",
"enhancer",
"operator",
"ncRNA",
"lncRNA",
"tRNA",
"rRNA",
"snRNA",
"snoRNA",
"origin",
"repeat_region",
"LTR",
"transposon",
"engineered_region",
"misc_structure",
"protein_bind",
"primer_bind",
"misc_binding",
"misc_difference",
"resistance marker",
"tag",
"reporter",
"crispr_target",
"recombination_site",
"att_site",
"loxP_site",
"frt_site",
"source",
"misc_feature"
]
},
"start1": {
"type": "integer",
"minimum": 1
},
"end1": {
"type": "integer",
"minimum": 1
},
"strand": {
"type": "string",
"enum": [
"+",
"-"
]
},
"qualifiers": {
"type": "object"
}
},
"required": [
"type",
"start1",
"end1"
],
"additionalProperties": false
}
},
"featureId": {
"type": "string",
"description": "Feature ID to delete (for delete action)."
}
},
"required": [
"action"
],
"additionalProperties": false
}
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