pocketgull.app
Pocket Gull is a real-time clinical AI consult engine powered by Google Gemini. Features 10D multi-paradigm strategy, FHIR R4 export & 3D spatial anatomy.
First seen 2026-11-05 · Last seen 2026-11-05 · Source: webmcp.com
Answer 20 · Act 75 · Transact 3 · Score: Not yet scored
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simulate_chromatin_loop_extrusion
Simulates 3D chromatin polymer dynamics, active loop extrusion by Cohesin motors, and generates the 2D Hi-C contact probability matrix across CTCF boundary barriers.
Page: /
Input schema
| Property | Type | Required | Description |
|---|---|---|---|
locusLengthKb |
number | no | Genomic locus length in kilobases (default: 2000) |
cohesinSpeedKbPerSec |
number | no | Cohesin extrusion velocity in kb/s (default: 1.0) |
ctcfPermeability |
number | no | CTCF boundary permeability (0.0 strict barrier to 1.0 leaky, default: 0.20) |
Raw JSON schema
{
"type": "object",
"properties": {
"locusLengthKb": {
"type": "number",
"description": "Genomic locus length in kilobases (default: 2000)"
},
"cohesinSpeedKbPerSec": {
"type": "number",
"description": "Cohesin extrusion velocity in kb/s (default: 1.0)"
},
"ctcfPermeability": {
"type": "number",
"description": "CTCF boundary permeability (0.0 strict barrier to 1.0 leaky, default: 0.20)"
}
}
}
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